BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F10LP1|AL426565
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1508 1615 0.0
>3x_Contig1508
Length = 7899
Score = 1615 bits (814), Expect = 0.0
Identities = 831/836 (99%), Gaps = 2/836 (0%)
Strand = Plus / Plus
Query: 1 gatccaaatcgtgtganagcccgtgaatagaaaggagaagtgttggttaccctgagttcg 60
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6902 gatccaaatcgtgtgaaagcccgtgaaaagaaaggagaagtgttggttaccctgagttcg 6961
Query: 61 tgatttgcaagggaaagaatcaaccaacgcttatcaagtcttctgtcatcggacagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6962 tgatttgcaagggaaagaatcaaccaacgcttatcaagtcttctgtcatcggacagtttt 7021
Query: 121 ctattttacttctcgggtaagacattttcactgaactttccgattacattccccggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7022 ctattttacttctcgggtaagacattttcactgaactttccgattacattccccggtggg 7081
Query: 181 tcgtattcgcatactgtatattgaccgtaatactggccacatcgtataaatgcacagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7082 tcgtattcgcatactgtatattgaccgtaatactggccacatcgtataaatgcacagcca 7141
Query: 241 agtttcgaggtatttttccataccagctgggtgaaatgtcctgtatttgctgcgaactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7142 agtttcgaggtatttttccataccagctgggtgaaatgtcctgtatttgctgcgaactgt 7201
Query: 301 gggttgttaaaatcgtacagttttacctcgttataccatgctagaacagctgaggtagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7202 gggttgttaaaatcgtacagttttacctcgttataccatgctagaacagctgaggtagta 7261
Query: 361 ttatatcctagagcaaggttctctccgtaaggcagctttgagtgttctaattgcccgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7262 ttatatcctagagcaaggttctctccgtaaggcagctttgagtgttctaattgcccgttg 7321
Query: 421 catacgtaagaattggcgaaattttgtgctctagatgcaagttctggagcccaaactagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7322 catacgtaagaattggcgaaattttgtgctctagatgcaagttctggagcccaaactagc 7381
Query: 481 gatgaaacctgatgtttcttgcgtaatgagttgtgcacgtccaggatttccgttttgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7382 gatgaaacctgatgtttcttgcgtaatgagttgtgcacgtccaggatttccgttttgaaa 7441
Query: 541 tccgggtccgtggccgttggttttgtggacacttgttccgtgaaggtgccggag--tgtt 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7442 tccgggtccgtggccgttggttttgtggacacttgttccgtgaaggtgccggaggctgtt 7501
Query: 599 ctgtaaacaattgttcttgaagttgtgaaatgtgttgtcgttgagacggttttcgttctt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7502 ctgtaaacaattgttcttgaagttgtgaaatgtgttgtcgttgagacggttttcgttctt 7561
Query: 659 attattcgaacagtgttgtattttgtcactgttataccctgtgcatgacacaagattttt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7562 attattcgaacagtgttgtattttgtcactgttataccctgtgcatgacacaagattttt 7621
Query: 719 gcgtggattagtaccaccaatatgagccagtkaacctgattcatttggcaggtgttgctc 778
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7622 gcgtggattagtaccaccaatatgagccagtaaacctgattcatttggcaggtgttgctc 7681
Query: 779 tatttccgaagtttatctatctgaaaaattatgcctcaagggttatagatacttaa 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7682 tatttccgaagtttatctatctgaaaaattatgcctcaagggttatagatacttaa 7737
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4656
Number of Sequences: 1807
Number of extensions: 4656
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)